BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D11SP1|AL425695
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1535 0.0
>3x_Contig1724
Length = 20938
Score = 1535 bits (773), Expect = 0.0
Identities = 780/783 (99%)
Strand = Plus / Plus
Query: 1 gatccaaaacaagctggacggaccagaagataccggagatggagatgaggaagaatccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18724 gatccaaaacaagctggacggaccagaagataccggagatggagatgaggaagaatccta 18783
Query: 61 tttgattcaggcagggagagtgatgcatatgacgttaaacatatgtttcaaagatcgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18784 tttgattcaggcagggagagtgatgcatatgacgttaaacatatgtttcaaagatcgtaa 18843
Query: 121 cgaaagagtggatgaaaataggaaaatcggtgttttctacattggtacattgttgttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18844 cgaaagagtggatgaaaataggaaaatcggtgttttctacattggtacattgttgttcaa 18903
Query: 181 gttgtacaaccggatcaaagcgtatggattattgaacaacatgtgtaaagtgttcgaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18904 gttgtacaaccggatcaaagcgtatggattattgaacaacatgtgtaaagtgttcgaatc 18963
Query: 241 tcatttcaatgaaatcggaccgtacctttctcgaatcaataatgatttaattgtcattcg 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 18964 tcatttcaatgaaatcggaccgtacctttctcgaatcaataatgatttacttgtcattcg 19023
Query: 301 attcaaattttacatggggctatactacgggtatgagaagaataactacgcattgggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19024 attcaaattttacatggggctatactacgggtatgagaagaataactacgcattgggatt 19083
Query: 361 caaatggctgcmagagacttttgacatctgtaccttgtatgagagcataccttccacgta 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19084 caaatggctgcaagagacttttgacatctgtaccttgtatgagagcataccttccacgta 19143
Query: 421 caaggtaagaagccaagtgctaatatatctaattccaatgaggatattacatttaagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19144 caaggtaagaagccaagtgctaatatatctaattccaatgaggatattacatttaagaca 19203
Query: 481 ttatccaaggttagcaccgttaagacggacatacccatcagtggctaaaatatacaccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19204 ttatccaaggttagcaccgttaagacggacatacccatcagtggctaaaatatacaccat 19263
Query: 541 gttggtgaaaagtttatgcactggcaacttgaaactctatgagaaatttattgaagacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19264 gttggtgaaaagtttatgcactggcaacttgaaactctatgagaaatttattgaagacaa 19323
Query: 601 tgagttttacctagtcaagaggaacttatacgttactgtcctcaagatgaaggaactagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19324 tgagttttacctagtcaagaggaacttatacgttactgtcctcaagatgaaggaactagt 19383
Query: 661 ggaattgaaacttgtgaaaaaagcttggatcttgaatggaggtaacactaaggtaccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19384 ggaattgaaacttgtgaaaaaagcttggatcttgaatggaggtaacactaaggtaccatt 19443
Query: 721 agacatgttggcaaaagcatttcaaatatcacgaggaacaccatgtcacgtgacagakaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 19444 agacatgttggcaaaagcatttcaaatatcacgaggaacaccatgtcacgtgacagaaaa 19503
Query: 781 tgt 783
|||
Sbjct: 19504 tgt 19506
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6026
Number of Sequences: 1807
Number of extensions: 6026
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)